BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C07LP1|AL426339
(278 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 461 e-130
>3x_Contig1619
Length = 7770
Score = 461 bits (232), Expect = e-130
Identities = 266/276 (96%), Gaps = 6/276 (2%)
Strand = Plus / Plus
Query: 1 agttaatgagacttgaactcatattaaatgcatgcaaagcattcgttctaccaaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4446 agttaatgagacttgaactcatattaaatgcatgcaaagcattcgttctaccaaatttaa 4505
Query: 61 ctataaaccctacatattatacaataattaagtctttaataggaattgaacctatatcat 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4506 ctataacccctacatattatacaataattaagtctttaataggaattgaacctatatcat 4565
Query: 121 ctcattaacagtgagaagacatatataaaccattaaagctataaaaactatatatttgaa 180
|||||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 4566 ctcattaacagtgagaagcttta-----accattaa-gctataaaaactatatatttgaa 4619
Query: 181 gggaataggaatcgaacctatgaagaacacagtcattgagtttacagctcaactccaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4620 gggaataggaatcgaacctatgaagaacacagtcattgagtttacagctcaactccaatt 4679
Query: 241 accaacattggagatccctcctatataaatatatat 276
||||||||||||||||||||||||||||||||||||
Sbjct: 4680 accaacattggagatccctcctatataaatatatat 4715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2301
Number of Sequences: 1807
Number of extensions: 2301
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 278
length of database: 10,358,551
effective HSP length: 16
effective length of query: 262
effective length of database: 10,329,639
effective search space: 2706365418
effective search space used: 2706365418
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 49 (97.9 bits)